PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID orange1.1g025091m
Common NameCISIN_1g023047mg
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family Dof
Protein Properties Length: 259aa    MW: 28165.3 Da    PI: 7.3233
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
orange1.1g025091mgenomeICGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof45.91.2e-1446743663
             zf-Dof 36 C.rryWtkGGalrnvPvGggrrknkksss 63
                       C rryWt+GG+lrn+PvGgg+rknk+sss
  orange1.1g025091m 46 CpRRYWTEGGSLRNIPVGGGSRKNKRSSS 74
                       549**********************9875 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
ProDomPD0074784.0E-82665IPR003851Zinc finger, Dof-type
PfamPF027017.1E-94671IPR003851Zinc finger, Dof-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 259 aa     Download sequence    Send to blast
MDTAQWPQEI VVKPIEEIVT NTCPKPASAA ALERKARPQK EQALNCPRRY WTEGGSLRNI  60
PVGGGSRKNK RSSSSSKKLP DPATPPSHHP HQNPKIHDHG EDLNLSFPAA TTQGYRSFSE  120
LVQLPNIDNK SQIPISSSTT TTTTTTSSQQ LSALELLTGI SSRGLNSFMP MPVPDPNAIY  180
APGFPMQDFK PTLNFSLDGL GSGYGSLHHQ SVQENNGRLL FPFEDLKQVS STSDHMEQNR  240
EHGDSSGYWT GMLGGGSW*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006476325.10.0PREDICTED: dof zinc finger protein DOF4.6 isoform X2
SwissprotQ8LAP81e-43DOF46_ARATH; Dof zinc finger protein DOF4.6
TrEMBLA0A067GMN10.0A0A067GMN1_CITSI; Uncharacterized protein
STRINGPOPTR_0003s14450.11e-114(Populus trichocarpa)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24060.15e-35Dof family protein